资源导航

1. Tablet: Tablet is a lightweight, high-performance graphical viewer for next generation sequence assemblies and alignments. Tablet is a lightweight, high-performance graphical viewer for next generation sequence assemblies and alignments. Tablet is a lightweight, high-performance graphical...; 标签：Genomics, Genotyping,Comparative genomics
2. CloudBurst: CloudBurst is a parallel read-mapping algorithm optimized for mapping next-generation sequence data to the human genome and other reference genomes.; 标签：SNP discovery, Genotyping,Personal genomics
3. MARGARITA: SNP discovery and genotyping from low-coverage sequencing data; 标签：SNP discovery, Genotyping
4. CopySeq: CopySeq analyzes the depth-of-coverage of whole genome resequencing data to predict CNVs and to infer quantitative locus copy-number genotypes.; 标签：Structural variation, Copy number estimation, Genotyping,Personal genomics
5. Bis-SNP: BisSNP is a package based on the Genome Analysis Toolkit (GATK) map-reduce framework for genotyping in bisulfite treated massively parallel sequencing (Bisulfite-seq, NOMe-seq and RRBS) on Illumina platform. It uses bayesian inference with either manually specified or automatically esti...; 标签：SNP discovery, Genotyping, DNA methylation, Bisulfite Sequencing
6. DiscoSnp: discoSnps : qualitative de-novo SNP caller. Extremely low memory and time efficient. No reference genome needed. Call both homozygous and heterozygous SNPs.; 标签：Population Genomics,Comparative genomics,Barcoding, DNA-Seq, De novo assembly, Genotyping, High-throughput sequencing

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